Inheritance diagram for bbp::sonata::EdgePopulation:

Public Member Functions
	EdgePopulation (const std::string &h5FilePath, const std::string &csvFilePath, const std::string &name)

	EdgePopulation (const std::string &h5FilePath, const std::string &csvFilePath, const std::string &name, const Hdf5Reader &hdf5_reader)

std::string	source () const

std::string	target () const

std::vector< NodeID >	sourceNodeIDs (const Selection &selection) const

std::vector< NodeID >	targetNodeIDs (const Selection &selection) const

Selection	afferentEdges (const std::vector< NodeID > &target) const

Selection	efferentEdges (const std::vector< NodeID > &source) const

Selection	connectingEdges (const std::vector< NodeID > &source, const std::vector< NodeID > &target) const

Public Member Functions inherited from bbp::sonata::Population
std::string	name () const

uint64_t	size () const

Selection	selectAll () const

const std::set< std::string > &	attributeNames () const

const std::set< std::string > &	enumerationNames () const

template<typename T >
std::vector< T >	getAttribute (const std::string &name, const Selection &selection) const

template<typename T >
std::vector< T >	getAttribute (const std::string &name, const Selection &selection, const T &defaultValue) const

template<typename T >
std::vector< T >	getEnumeration (const std::string &name, const Selection &selection) const

std::vector< std::string >	enumerationValues (const std::string &name) const

std::string	_attributeDataType (const std::string &name, bool translate_enumeration=false) const

const std::set< std::string > &	dynamicsAttributeNames () const

template<typename T >
std::vector< T >	getDynamicsAttribute (const std::string &name, const Selection &selection) const

template<typename T >
std::vector< T >	getDynamicsAttribute (const std::string &name, const Selection &selection, const T &defaultValue) const

std::string	_dynamicsAttributeDataType (const std::string &name) const

template<typename T >
Selection	filterAttribute (const std::string &name, std::function< bool(const T)> pred) const

Static Public Member Functions
static void	writeIndices (const std::string &h5FilePath, const std::string &population, uint64_t sourceNodeCount, uint64_t targetNodeCount, bool overwrite=false)

Static Public Attributes
constexpr static const char *	ELEMENT = "edge"

Additional Inherited Members
Protected Member Functions inherited from bbp::sonata::Population
	Population (const std::string &h5FilePath, const std::string &csvFilePath, const std::string &name, const std::string &prefix, const Hdf5Reader &hdf5_reader)

	Population (const Population &)=delete

	Population (Population &&) noexcept

Protected Attributes inherited from bbp::sonata::Population
std::unique_ptr< Impl >	impl_

Member Function Documentation

◆ afferentEdges()

Selection bbp::sonata::EdgePopulation::afferentEdges ( const std::vector< NodeID > & target ) const

Return inbound edges for given node IDs.

◆ connectingEdges()

Selection bbp::sonata::EdgePopulation::connectingEdges	(	const std::vector< NodeID > &	source,
		const std::vector< NodeID > &	target
	)		const

Return edges connecting two given nodes.

◆ efferentEdges()

Selection bbp::sonata::EdgePopulation::efferentEdges ( const std::vector< NodeID > & source ) const

Return outbound edges for given node IDs.

◆ source()

std::string bbp::sonata::EdgePopulation::source ( ) const

Name of source population extracted from 'source_node_id' dataset

◆ sourceNodeIDs()

std::vector<NodeID> bbp::sonata::EdgePopulation::sourceNodeIDs ( const Selection & selection ) const

Return source node IDs for a given edge selection

◆ target()

std::string bbp::sonata::EdgePopulation::target ( ) const

Name of target population extracted from 'target_node_id' dataset

◆ targetNodeIDs()

std::vector<NodeID> bbp::sonata::EdgePopulation::targetNodeIDs ( const Selection & selection ) const

Return target node IDs for a given edge selection

◆ writeIndices()

static void bbp::sonata::EdgePopulation::writeIndices	(	const std::string &	h5FilePath,
		const std::string &	population,
		uint64_t	sourceNodeCount,
		uint64_t	targetNodeCount,
		bool	overwrite = `false`
	)

static

Write bidirectional node->edge indices to EdgePopulation HDF5.

Public Member Functions

Static Public Member Functions

Static Public Attributes

Additional Inherited Members